STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g3970SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (769 aa)    
Predicted Functional Partners:
EVJ58_g3941
Uncharacterized protein.
   
 
 0.968
EVJ58_g1022
PUM-HD domain-containing protein.
   
   0.935
EVJ58_g2816
RRM domain-containing protein.
   
 
 0.933
EVJ58_g5516
Nop domain-containing protein.
   
 
 0.926
EVJ58_g7288
Brix domain-containing protein.
   
 
 0.923
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.922
EVJ58_g2909
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
 
 0.916
EVJ58_g4245
Uncharacterized protein.
   
 
 0.913
EVJ58_g4930
CBF domain-containing protein.
   
 
 0.909
EVJ58_g9606
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
0.904
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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