STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g3980RRM domain-containing protein. (180 aa)    
Predicted Functional Partners:
EVJ58_g3050
Nuclear cap-binding protein subunit 2.
    
 0.938
EVJ58_g7899
Fip1 domain-containing protein.
    
 0.914
EVJ58_g3779
Small nuclear ribonucleoprotein Sm D3.
   
 0.912
EVJ58_g2184
Sm domain-containing protein.
   
 0.909
EVJ58_g1047
Small nuclear ribonucleoprotein Sm D2.
   
 0.907
EVJ58_g9513
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.906
EVJ58_g6007
Uncharacterized protein.
   
 0.906
EVJ58_g5032
Uncharacterized protein.
    
 0.905
EVJ58_g8686
Uncharacterized protein.
   
 0.897
EVJ58_g962
Uncharacterized protein.
    
 0.887
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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