STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g3181F-box domain-containing protein. (205 aa)    
Predicted Functional Partners:
EVJ58_g6687
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.563
EVJ58_g4420
MPN domain-containing protein.
    
  0.501
EVJ58_g2743
Uncharacterized protein.
    
  0.495
EVJ58_g5512
Uncharacterized protein.
    
  0.494
EVJ58_g6902
MRG domain-containing protein.
    
  0.480
EVJ58_g2629
Uncharacterized protein.
    
  0.478
EVJ58_g1334
BTD domain-containing protein.
    
  0.478
EVJ58_g384
WD_REPEATS_REGION domain-containing protein.
    
  0.474
EVJ58_g2906
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.472
EVJ58_g10583
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.463
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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