STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g1952Uncharacterized protein. (320 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.667
EVJ58_g3496
Uncharacterized protein.
   
  0.660
EVJ58_g9842
Ipi1_N domain-containing protein.
    
  0.638
EVJ58_g6185
Uncharacterized protein.
    
  0.638
EVJ58_g5581
Ribosomal_L2_C domain-containing protein.
    
  0.595
EVJ58_g58
Uncharacterized protein.
    
  0.577
EVJ58_g10204
Uncharacterized protein.
    
  0.575
EVJ58_g7077
CLP1_P domain-containing protein.
    
  0.568
EVJ58_g3974
Uncharacterized protein.
    
  0.563
EVJ58_g9956
EF-hand domain-containing protein.
    
  0.559
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.