STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g2414UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)    
Predicted Functional Partners:
EVJ58_g5456
UBA_e1_C domain-containing protein.
   
 0.994
EVJ58_g3434
RING-type domain-containing protein.
   
 0.977
EVJ58_g1057
Uncharacterized protein.
   
 0.974
EVJ58_g2306
Ubiquitin-like domain-containing protein.
    
 0.969
EVJ58_g4686
Ubiquitin-like domain-containing protein.
    
 0.961
EVJ58_g785
HECT domain-containing protein.
    
 0.942
EVJ58_g9063
Uncharacterized protein.
   
 0.933
EVJ58_g7146
Uncharacterized protein.
   
 0.933
EVJ58_g1202
Ubiquitin-like domain-containing protein.
   
 0.933
EVJ58_g8318
Uncharacterized protein.
   
 0.931
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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