STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g585Uncharacterized protein. (733 aa)    
Predicted Functional Partners:
EVJ58_g2678
Uncharacterized protein.
    
 0.958
EVJ58_g9333
Uncharacterized protein.
    
 0.955
EVJ58_g7411
Uncharacterized protein.
   
 0.955
EVJ58_g7028
Uncharacterized protein.
    
 
 0.913
EVJ58_g856
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
    
 
 0.857
EVJ58_g7914
Uncharacterized protein.
    
 0.816
EVJ58_g10367
JmjN domain-containing protein.
    
 0.761
EVJ58_g7172
Uncharacterized protein.
    
 0.748
EVJ58_g7129
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
  0.690
EVJ58_g3133
RNB domain-containing protein; Belongs to the RNR ribonuclease family.
    
 
 0.683
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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