STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g452-Hacid_dh_C domain-containing protein. (356 aa)    
Predicted Functional Partners:
EVJ58_g7291
Tryptophan synthase.
    
  0.810
EVJ58_g7776
Aminotran_5 domain-containing protein.
  
 
 0.643
EVJ58_g3988
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.638
EVJ58_g10834
CBM20 domain-containing protein.
  
 0.626
EVJ58_g5335
PARP catalytic domain-containing protein.
  
 0.626
EVJ58_g2630
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.626
EVJ58_g6192
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
   
  0.601
EVJ58_g111
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.584
EVJ58_g4079
Uncharacterized protein.
   
 0.565
EVJ58_g1243
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.553
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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