STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090L588Charged multivesicular body protein 2a. (177 aa)    
Predicted Functional Partners:
A0A090L5Z6
Charged multivesicular body protein 1b.
   
 0.976
A0A090LC44
BcDNA.GH02678; Belongs to the AAA ATPase family.
    
 0.973
A0A090LDB4
Charged multivesicular body protein 6.
   
 0.930
A0A090LII4
GH13992p.
   
 0.925
A0A090N0S1
GH13992p.
   
 0.925
A0A090LGR1
IST1 homolog.
    
 0.889
A0A090MV07
Charged multivesicular body protein 7.
    
 0.883
A0A090LFZ8
Vacuolar protein-sorting-associated protein 25.
   
 0.872
A0A090LHI7
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.871
A0A090LGP1
Vacuolar protein-sorting-associated protein 36.
    
 0.870
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.