STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090L6I4Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
A0A090L6C1
Striated muscle preferentially expressed protein kinase.
    
 0.918
A0A090L846
Hemicentin-1.
    
 0.918
A0A090LDJ3
Striated muscle preferentially expressed protein kinase.
    
 0.918
A0A090LGB9
annotation not available
   
 0.763
A0A090LKB1
annotation not available
   
 0.741
rps14
40S ribosomal protein S14; 40S ribosomal protein S14; Ribosomal protein S14; Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.704
A0A090KWU0
60S ribosomal protein L30.
    
 0.690
A0A090LJR6
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.690
A0A090KZP5
28S ribosomal protein S11, mitochondrial.
   
  0.674
A0A090LCM7
Guanine nucleotide-binding protein-like 3-like protein.
   
 0.647
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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