STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090L814F-box domain-containing protein. (535 aa)    
Predicted Functional Partners:
A0A090L3I5
Belongs to the SKP1 family.
   
 0.813
A0A090MWQ0
Belongs to the SKP1 family.
   
 0.813
A0A090LDD9
Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family.
    
 0.769
A0A090LKK1
Cullin 1a; Belongs to the cullin family.
    
 0.769
A0A090MXW6
Cullin 1a; Belongs to the cullin family.
    
 0.769
A0A090L8N1
NEDD8.
    
 0.756
A0A090L551
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.733
A0A090KYD5
RING-box protein 2.
    
 0.732
A0A090L2K6
RING-box protein 2.
    
 0.732
A0A090LAI7
E3 ubiquitin-protein ligase RBX1.
    
 0.732
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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