Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A090L348 | A0A090L5W4 | 28S ribosomal protein S21, mitochondrial. | 39S ribosomal protein L38, mitochondrial. | 0.807 |
A0A090L348 | A0A090L8S1 | 28S ribosomal protein S21, mitochondrial. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.718 |
A0A090L348 | A0A090LFD5 | 28S ribosomal protein S21, mitochondrial. | Transcription initiation factor TFIID subunit 11. | 0.641 |
A0A090L348 | A0A090MXB5 | 28S ribosomal protein S21, mitochondrial. | 39S ribosomal protein L2, mitochondrial. | 0.940 |
A0A090L527 | A0A090L836 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | annotation not available | 0.711 |
A0A090L527 | A0A090L8S1 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.711 |
A0A090L527 | A0A090LFD5 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Transcription initiation factor TFIID subunit 11. | 0.711 |
A0A090L527 | A0A090LLB2 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Prefoldin subunit 6. | 0.740 |
A0A090L527 | A0A090MXB5 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 39S ribosomal protein L2, mitochondrial. | 0.739 |
A0A090L527 | A0A090MYJ8 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | 0.711 |
A0A090L5W4 | A0A090L348 | 39S ribosomal protein L38, mitochondrial. | 28S ribosomal protein S21, mitochondrial. | 0.807 |
A0A090L5W4 | A0A090L836 | 39S ribosomal protein L38, mitochondrial. | annotation not available | 0.711 |
A0A090L5W4 | A0A090L8S1 | 39S ribosomal protein L38, mitochondrial. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.711 |
A0A090L5W4 | A0A090MXB5 | 39S ribosomal protein L38, mitochondrial. | 39S ribosomal protein L2, mitochondrial. | 0.934 |
A0A090L836 | A0A090L527 | annotation not available | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.711 |
A0A090L836 | A0A090L5W4 | annotation not available | 39S ribosomal protein L38, mitochondrial. | 0.711 |
A0A090L836 | A0A090L8S1 | annotation not available | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.711 |
A0A090L836 | A0A090LLB2 | annotation not available | Prefoldin subunit 6. | 0.711 |
A0A090L836 | A0A090MXB5 | annotation not available | 39S ribosomal protein L2, mitochondrial. | 0.711 |
A0A090L836 | A0A090MYJ8 | annotation not available | Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. | 0.711 |
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