STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090L9W1Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)    
Predicted Functional Partners:
A0A090L551
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
A0A090L832
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.999
A0A090LKF4
Nucleolar protein 58.
   
 0.999
A0A090LQ23
FI04781p.
   
 0.999
A0A090L197
U3 small nucleolar RNA-interacting protein 2.
   
 0.998
A0A090L6Y4
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 0.998
A0A090LE67
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.998
A0A090L7H7
U4/U6 small nuclear ribonucleoprotein Prp3.
   
 0.997
A0A090LFT3
Cirhin.
   
 0.997
A0A090MXD5
Activating signal cointegrator 1 complex subunit 3.
   
 0.996
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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