Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A090LAB5Mitochondrial inner membrane protease subunit 1. (161 aa)    
Predicted Functional Partners:
A0A090LEN5
annotation not available
    
 0.899
A0A090LHJ1
annotation not available
   
 0.875
A0A090L705
Vacuolar membrane-associated protein Iml1 family-containing protein.
    
 0.871
A0A090LKV0
Mitochondrial inner membrane protease subunit 2.
  
 
0.853
A0A090LGD9
Signal peptidase complex subunit 2.
   
 0.849
A0A090LPA4
Protein SZT2.
    
 0.790
A0A090LTP5
Protein SZT2.
    
 0.790
A0A090LQK3
Elongator complex protein 4.
      
 0.772
A0A090LIS9
X-ray repair cross-complementing protein 6.
    
 0.729
A0A090L9P1
Nitrogen permease regulator 3-like protein.
   
 0.706
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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