STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LAH8Protein encore. (472 aa)    
Predicted Functional Partners:
A0A090LHS1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.501
A0A090MX66
Cytochrome b-c1 complex subunit 1, mitochondrial.
   
 
 0.496
A0A090MYC2
Cytochrome b-c1 complex subunit 1, mitochondrial.
   
 
 0.496
A0A090LEE9
DNA-directed RNA polymerases I and III subunit RPAC2.
    
 
 0.456
A0A090LGR2
Cytochrome b-c1 complex subunit 2, mitochondrial.
    
 
 0.439
A0A090L5N1
Mitochondrial-processing peptidase subunit alpha.
    
   0.416
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.