STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LAI6annotation not available (341 aa)    
Predicted Functional Partners:
A0A090L765
annotation not available
    
 
 0.892
A0A090L6I9
Protein crooked neck.
   
 
 0.858
A0A090LPU0
Splicing factor 3A subunit 2.
   
 
 0.828
A0A090L1F5
Splicing factor 3B subunit 2.
   
 
 0.778
A0A090L3E5
Splicing factor 3B subunit 3.
    
 
 0.771
A0A090LBY9
annotation not available
   
 0.765
A0A090LLV4
Probable ATP-dependent RNA helicase DDX46; Belongs to the DEAD box helicase family.
   
 0.765
A0A090MZ95
Uncharacterized protein.
   
 0.765
A0A090MZ97
annotation not available
   
 0.765
A0A090MUJ7
Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family.
   
 0.734
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.