STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LD48Glutamyl aminopeptidase; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (1511 aa)    
Predicted Functional Partners:
A0A090LL35
Aspartate aminotransferase.
   
 0.724
A0A090LMA9
Aspartate aminotransferase.
   
 0.724
A0A090L704
Dipeptidase B.
  
 0.714
A0A090MU00
Cystathionine gamma-lyase.
  
 
 0.667
A0A090L367
Aminotran_1_2 domain-containing protein.
  
 
 0.644
A0A090LNA4
Glutamate--cysteine ligase catalytic subunit.
     
 0.639
A0A090MZX5
Glutathione synthetase.
   
 
  0.634
A0A090L396
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
    
  0.629
A0A090LT19
Cysteine dioxygenase.
   
 
  0.626
A0A090L6X1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.602
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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