STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LDD2Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. (407 aa)    
Predicted Functional Partners:
A0A090LQF0
Cytochrome c oxidase subunit 1.
 
 0.999
A0A090L6E7
Cytochrome b5 reductase 4.
  
 0.997
A0A090L4G9
Cytochrome c oxidase assembly protein COX15 homolog.
  
 0.995
A0A090L1Z4
Cytochrome c1, heme protein, mitochondrial.
  
 0.956
A0A090MXY9
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.944
A0A090L6H4
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.943
A0A090MXX8
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 
 0.918
A0A090L2M7
Cytochrome c oxidase copper chaperone.
     
 0.907
A0A090L5U6
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
 
 0.894
A0A090L3J2
Cytochrome c oxidase subunit 6B1.
    
 0.889
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.