STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LDJ4Prohormone convertase 1; Belongs to the peptidase S8 family. (481 aa)    
Predicted Functional Partners:
A0A090LD07
Protein goliath.
   
  0.705
A0A090LDC6
Zinc finger, RING-type domain and Zinc finger, RING/FYVE/PHD-type domain-containing protein.
   
  0.705
A0A090LI14
E3 ubiquitin-protein ligase RNF181.
   
  0.705
A0A090LJX1
Zinc finger, RING-type domain and Zinc finger, RING/FYVE/PHD-type domain-containing protein.
   
  0.705
A0A090MWK6
Uncharacterized protein.
   
  0.705
A0A090KZ58
Alpha-galactosidase.
   
 0.656
A0A090MWG9
Beta-hexosaminidase.
  
 0.624
A0A090MXJ2
Chondroitin sulfate proteoglycan 4.
    
 0.623
A0A090LBY6
Teneurin-3.
     
 0.595
A0A090MZF0
LD29161p.
    
 0.574
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.