STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LDT0Uncharacterized protein. (141 aa)    
Predicted Functional Partners:
A0A090N082
Numb-associated kinase.
    
  0.997
A0A090L518
Snapin/Pallidin/Snn1 family-containing protein.
   
 0.860
A0A090LM15
Biogenesis of lysosome-related organelles complex 1 subunit 2.
   
 
 0.821
A0A090L1Y4
AP-1 complex subunit gamma.
    
  0.634
A0A090LG78
Protein MEF2BNB.
   
 
 0.627
A0A090LMG3
Garnet.
    
 0.618
A0A090LN99
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 
  0.608
A0A090L0Y7
annotation not available
     
 0.602
A0A090L3Q9
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
  0.598
A0A090LKE0
Clathrin heavy chain.
    
  0.598
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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