Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A090KX93 | A0A090LB58 | General transcription factor IIH subunit 5. | DNA excision repair protein haywire. | 0.987 |
A0A090KX93 | A0A090LBB6 | General transcription factor IIH subunit 5. | General transcription factor IIH subunit 1. | 0.984 |
A0A090KX93 | A0A090LCH7 | General transcription factor IIH subunit 5. | Xeroderma pigmentosum D. | 0.977 |
A0A090KX93 | A0A090LDK4 | General transcription factor IIH subunit 5. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
A0A090KX93 | A0A090LEC7 | General transcription factor IIH subunit 5. | General transcription factor IIH subunit. | 0.987 |
A0A090KX93 | A0A090LES0 | General transcription factor IIH subunit 5. | General transcription factor IIH subunit 3. | 0.993 |
A0A090KX93 | A0A090LJY4 | General transcription factor IIH subunit 5. | General transcription factor IIE subunit 1. | 0.993 |
A0A090KX93 | A0A090LKM7 | General transcription factor IIH subunit 5. | CDK-activating kinase assembly factor MAT1. | 0.960 |
A0A090KX93 | A0A090LL68 | General transcription factor IIH subunit 5. | Cyclin-H. | 0.787 |
A0A090KX93 | A0A090MVK7 | General transcription factor IIH subunit 5. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.993 |
A0A090LB58 | A0A090KX93 | DNA excision repair protein haywire. | General transcription factor IIH subunit 5. | 0.987 |
A0A090LB58 | A0A090LBB6 | DNA excision repair protein haywire. | General transcription factor IIH subunit 1. | 0.999 |
A0A090LB58 | A0A090LCH7 | DNA excision repair protein haywire. | Xeroderma pigmentosum D. | 0.999 |
A0A090LB58 | A0A090LDK4 | DNA excision repair protein haywire. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
A0A090LB58 | A0A090LEC7 | DNA excision repair protein haywire. | General transcription factor IIH subunit. | 0.999 |
A0A090LB58 | A0A090LES0 | DNA excision repair protein haywire. | General transcription factor IIH subunit 3. | 0.999 |
A0A090LB58 | A0A090LJY4 | DNA excision repair protein haywire. | General transcription factor IIE subunit 1. | 0.998 |
A0A090LB58 | A0A090LKM7 | DNA excision repair protein haywire. | CDK-activating kinase assembly factor MAT1. | 0.998 |
A0A090LB58 | A0A090LL68 | DNA excision repair protein haywire. | Cyclin-H. | 0.995 |
A0A090LB58 | A0A090MVK7 | DNA excision repair protein haywire. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.998 |
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