Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A090LED2Nuclear receptor subfamily 2 group F member 6. (475 aa)    
Predicted Functional Partners:
A0A090LB50
Receptor protein-tyrosine kinase.
    
 0.883
A0A090LDI2
COP9 signalosome complex subunit 2.
    
   0.833
A0A090MZ01
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.830
A0A090LA40
Homeobox domain and Homeodomain-like and Homeodomain, metazoa-containing protein.
    
 0.823
A0A090LDP9
Homeobox domain and Homeobox KN domain and Homeodomain-like-containing protein.
    
 0.807
A0A090LCE8
Smrter.
    
 0.783
A0A090N040
WW domain-containing protein.
    
 0.783
A0A090LK85
Cyclic AMP response element-binding protein B.
    
 0.766
A0A090LP61
annotation not available
    
 
 0.766
A0A090LDU1
Porin domain and Eukaryotic porin/Tom40 family-containing protein.
    
 
 0.745
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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