Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LED7annotation not available (323 aa)    
Predicted Functional Partners:
A0A090LB41
Serine/threonine-protein kinase RIO2.
   
 0.579
A0A090LCS3
Protein LTV1 homolog.
    
 0.574
A0A090L946
Bystin.
    
 0.570
A0A090LGR0
Pre-rRNA-processing protein TSR1 homolog.
    
 0.569
A0A090LF90
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.551
A0A090LN44
Glycogen synthase kinase 3 alpha.
  
 0.533
A0A090LDX0
40S ribosomal protein S3.
    
 0.525
A0A090LPN8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.512
A0A090L0K5
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
  0.510
A0A090LB34
Aryl hydrocarbon receptor nuclear translocator homolog.
    
 0.500
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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