STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LIA9Centromere/kinetochore protein zw10 homolog. (748 aa)    
Predicted Functional Partners:
A0A090KWH5
Syntaxin-18.
    
 0.999
A0A090LI29
Uncharacterized protein.
    
 0.999
A0A090LH76
RAD50-interacting protein 1.
   
 0.996
A0A090LK91
RZZ complex, subunit zwilch family-containing protein.
    
 0.995
A0A090L673
Vesicle transport protein USE1.
    
 0.985
A0A090LFC4
Non-specific serine/threonine protein kinase.
    
 0.969
A0A090LQ53
WD40-repeat-containing domain-containing protein.
   
 0.965
A0A090LQB0
Uncharacterized protein.
   
 0.965
A0A090L0N2
Sec22 ortholog; Belongs to the synaptobrevin family.
    
 0.964
A0A090L934
Coatomer subunit alpha.
    
 0.941
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.