STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LJE8Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
A0A090L6C1
Striated muscle preferentially expressed protein kinase.
    
 0.800
A0A090L846
Hemicentin-1.
    
 0.800
A0A090LDJ3
Striated muscle preferentially expressed protein kinase.
    
 0.800
A0A090LGW8
SET domain-containing protein.
    
 0.607
A0A090L9V7
MAGUK p55 subfamily member 5; Belongs to the MAGUK family.
    
 0.581
A0A090LGB9
annotation not available
    
  0.581
A0A090LC01
Ubiquitin-40S ribosomal protein S27a.
    
  0.546
A0A090L7N9
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L.
    
  0.530
A0A090LAF1
PDF receptor; Belongs to the G-protein coupled receptor 2 family.
    
 0.523
A0A090LAZ6
Belongs to the G-protein coupled receptor 2 family.
    
 0.523
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.