STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LJS3Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)    
Predicted Functional Partners:
A0A090MU36
E3 ubiquitin-protein ligase TRIP12.
   
 0.994
A0A090LI61
MIP16420p.
   
 0.992
A0A090LKS8
Polyubiquitin-C.
   
 0.986
A0A090MUL8
Peroxisome assembly protein 12.
    
 0.985
A0A090LC01
Ubiquitin-40S ribosomal protein S27a.
   
 0.984
A0A090LAI7
E3 ubiquitin-protein ligase RBX1.
   
 0.981
A0A090L1Q1
Zinc finger, RING-type domain and Bcr-Abl oncoprotein oligomerisation domain-containing protein.
   
 0.979
A0A090L9Z1
AT07979p1.
    
 0.977
A0A090LD11
FANCI_HD2 domain-containing protein.
   
 0.975
A0A090LB04
Peroxisome biogenesis factor 10.
    
 0.969
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.