STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LK25annotation not available (709 aa)    
Predicted Functional Partners:
A0A090LDD9
Cullin, N-terminal domain and Cullin repeat-like-containing domain-containing protein; Belongs to the cullin family.
    
 0.715
A0A090LKK1
Cullin 1a; Belongs to the cullin family.
    
 0.715
A0A090MXW6
Cullin 1a; Belongs to the cullin family.
    
 0.715
A0A090LS09
DnaJ homolog subfamily C member 2.
     
 0.580
A0A090L8N1
NEDD8.
     
 0.578
A0A090LIL8
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
  0.565
A0A090KYD5
RING-box protein 2.
    
 0.548
A0A090L2K6
RING-box protein 2.
    
 0.548
A0A090LAI7
E3 ubiquitin-protein ligase RBX1.
    
 0.548
A0A090LDF2
COP9 signalosome complex subunit 5.
    
  0.538
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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