STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LM18annotation not available (780 aa)    
Predicted Functional Partners:
A0A090L912
Ras-related protein Rab-35.
    
 
 0.926
A0A090MVA0
ADP-ribosylation factor GTPase activating protein 3.
    
0.904
A0A090MYE3
Arf GTPase activating protein family-containing protein.
    
0.887
A0A090LMQ6
Caspase-2; Belongs to the peptidase C14A family.
    
 0.880
A0A090LCL5
Uncharacterized protein.
    
 0.834
A0A090MYU4
Netrin receptor DCC.
   
  0.833
A0A090LN25
Nuclear fallout.
    
 0.817
A0A090L843
ADP-ribosylation factor GTPase-activating protein 1.
   
0.788
A0A090L9G5
ADP-ribosylation factor GTPase-activating protein 1.
   
0.788
A0A090MVI2
Hly-III-related family-containing protein.
    
 0.781
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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