STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090LN24Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
A0A090L7P9
Protein unc-79 homolog.
    
 
 0.997
A0A090L3K6
Voltage-dependent calcium channel type A subunit alpha-1.
   
 
 0.650
A0A090LEN0
Narrow abdomen.
   
 
 0.649
A0A090LSU7
Narrow abdomen.
   
 
 0.649
A0A090LES5
Tetratricopeptide repeat protein 21B.
   
 
 0.648
A0A090LL16
Uncharacterized protein.
   
 
 0.648
A0A090LFH4
Protein unc-80 homolog.
    
 
 0.426
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.