STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MXM2Putative transferase CAF17, mitochondrial. (268 aa)    
Predicted Functional Partners:
A0A090L6X1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.906
A0A090L0D3
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
     
 0.903
A0A090L1U3
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.878
A0A090LDK5
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
     
 0.867
A0A090LNB3
Iron-sulfur cluster assembly 1 homolog, mitochondrial.
  
 
 0.863
A0A090LH65
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial.
     
 0.861
A0A090LI81
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.837
A0A090LIW5
Thymidylate synthase.
    
  0.814
A0A090LIE0
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.751
A0A090KZU6
annotation not available
  
  
 0.740
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.