STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MYV1BRWD3. (1662 aa)    
Predicted Functional Partners:
A0A090LRX2
ATP-dependent helicase brm.
   
 0.880
A0A090L2G5
annotation not available
   
 0.839
A0A090LEC5
Transcription initiation factor TFIID subunit 3.
   
 0.839
A0A090L9G1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.827
A0A090LEY3
Transcription initiation factor TFIID subunit 1.
   
 0.821
A0A090LKB1
annotation not available
   
 0.815
A0A090LP62
Transcription initiation factor TFIID domain and Histone-fold domain-containing protein.
   
 0.815
A0A090MZF2
Transcription initiation factor TFIID subunit 2.
   
 0.814
A0A090LM92
Transcription initiation factor TFIID subunit 10.
    
 0.812
A0A090MZ26
Transcription initiation factor TFIID subunit 9.
    
 0.812
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.