STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090MZI7annotation not available (216 aa)    
Predicted Functional Partners:
A0A090MXL0
Structural maintenance of chromosomes protein.
   
 0.799
A0A090LBI9
annotation not available
    
 0.791
A0A090LH58
Structural maintenance of chromosomes protein.
    
 0.791
A0A090L6F2
Structural maintenance of chromosomes protein.
    
 0.767
A0A090LKC8
Structural maintenance of chromosomes protein.
    
 0.767
A0A090LLB0
Structural maintenance of chromosomes protein.
    
 0.767
A0A090LMK6
Small ubiquitin-related modifier.
   
 0.660
A0A090LJI9
SUMO-conjugating enzyme; SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.653
A0A090MW44
NPAS4 protein.
    
 0.653
A0A090LB68
annotation not available
    
 0.605
Your Current Organism:
Strongyloides ratti
NCBI taxonomy Id: 34506
Other names: S. ratti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.