Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L596_008127 | L596_008371 | A0A4U5PBH7 | A0A4U5PDD4 | Brix domain-containing protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.955 |
L596_008127 | L596_011025 | A0A4U5PBH7 | A0A4U5NT24 | Brix domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.999 |
L596_008127 | L596_014193 | A0A4U5PBH7 | A0A4U5NC10 | Brix domain-containing protein. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.990 |
L596_008127 | L596_015037 | A0A4U5PBH7 | A0A4U5NF13 | Brix domain-containing protein. | Ribosomal_L7Ae domain-containing protein. | 0.962 |
L596_008127 | L596_016862 | A0A4U5PBH7 | A0A4U5NJ85 | Brix domain-containing protein. | Uncharacterized protein. | 0.999 |
L596_008127 | L596_018701 | A0A4U5PBH7 | A0A4U5N5G6 | Brix domain-containing protein. | Brix domain-containing protein. | 0.997 |
L596_008127 | L596_023778 | A0A4U5PBH7 | A0A4U5MEQ6 | Brix domain-containing protein. | RRM domain-containing protein. | 0.999 |
L596_008127 | L596_023856 | A0A4U5PBH7 | A0A4U5MEZ5 | Brix domain-containing protein. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.995 |
L596_008127 | L596_026393 | A0A4U5PBH7 | A0A4U5M180 | Brix domain-containing protein. | Uncharacterized protein. | 0.999 |
L596_008127 | L596_028974 | A0A4U5PBH7 | A0A4U5LT94 | Brix domain-containing protein. | TRASH domain-containing protein. | 0.999 |
L596_008371 | L596_008127 | A0A4U5PDD4 | A0A4U5PBH7 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Brix domain-containing protein. | 0.955 |
L596_008371 | L596_011025 | A0A4U5PDD4 | A0A4U5NT24 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.828 |
L596_008371 | L596_014193 | A0A4U5PDD4 | A0A4U5NC10 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.658 |
L596_008371 | L596_015037 | A0A4U5PDD4 | A0A4U5NF13 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Ribosomal_L7Ae domain-containing protein. | 0.991 |
L596_008371 | L596_016862 | A0A4U5PDD4 | A0A4U5NJ85 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Uncharacterized protein. | 0.822 |
L596_008371 | L596_018701 | A0A4U5PDD4 | A0A4U5N5G6 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Brix domain-containing protein. | 0.813 |
L596_008371 | L596_023778 | A0A4U5PDD4 | A0A4U5MEQ6 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | RRM domain-containing protein. | 0.824 |
L596_008371 | L596_023856 | A0A4U5PDD4 | A0A4U5MEZ5 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.753 |
L596_008371 | L596_026393 | A0A4U5PDD4 | A0A4U5M180 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | Uncharacterized protein. | 0.978 |
L596_008371 | L596_028974 | A0A4U5PDD4 | A0A4U5LT94 | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | TRASH domain-containing protein. | 0.999 |
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