STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_029271HAP1 N-terminal domain-containing protein. (728 aa)    
Predicted Functional Partners:
L596_003884
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.908
L596_011156
Uncharacterized protein; Belongs to the actin family.
     
 0.822
L596_026402
Uncharacterized protein.
    
  0.817
L596_024479
Uncharacterized protein.
    
 0.789
L596_024478
Dynactin domain-containing protein.
    
 0.789
L596_006296
Dynactin domain-containing protein.
    
 0.789
L596_008491
Uncharacterized protein; Belongs to the actin family.
     
 0.754
L596_016955
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
     
 0.700
L596_016312
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
     
 0.700
L596_017115
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.663
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.