STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_024043Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (211 aa)    
Predicted Functional Partners:
L596_008380
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.974
L596_001189
Catalase domain-containing protein.
  
 0.892
L596_001843
DJ-1_PfpI domain-containing protein.
  
 0.878
L596_017891
DJ-1_PfpI domain-containing protein.
  
 0.869
L596_000433
Thioredoxin; Belongs to the thioredoxin family.
   
 0.865
L596_014544
Uncharacterized protein.
  
 0.832
L596_008263
VWFA domain-containing protein.
   
  0.821
L596_016794
Uncharacterized protein.
   
 0.809
L596_006151
Uncharacterized protein.
   
 0.809
L596_014934
Proteasome subunit beta.
   
 
 0.789
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.