STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_024550RPAP3_C domain-containing protein. (287 aa)    
Predicted Functional Partners:
L596_020228
RuvB-like helicase; Belongs to the RuvB family.
    
 0.998
L596_019715
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.988
L596_018447
Uncharacterized protein.
   
 0.957
L596_003328
Uncharacterized protein.
    
 0.920
L596_008042
FHA domain-containing protein.
   
 0.913
L596_014927
Uncharacterized protein; Belongs to the actin family.
    
 0.899
L596_019938
Uncharacterized protein.
    
 
 0.858
L596_014340
Uncharacterized protein.
   
 
 0.855
L596_007237
Uncharacterized protein.
    
 
 0.854
L596_009130
Uncharacterized protein.
    
 
 0.820
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.