STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_022540WD_REPEATS_REGION domain-containing protein. (302 aa)    
Predicted Functional Partners:
L596_029452
Robl_LC7 domain-containing protein.
   
 0.996
L596_019084
Uncharacterized protein.
    
 0.983
L596_029185
Uncharacterized protein.
   
 0.981
L596_007728
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 0.977
L596_011156
Uncharacterized protein; Belongs to the actin family.
   
 0.931
L596_024479
Uncharacterized protein.
    
 0.927
L596_024478
Dynactin domain-containing protein.
    
 0.927
L596_006296
Dynactin domain-containing protein.
    
 0.927
L596_024270
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family.
   
 0.920
L596_025583
Uncharacterized protein.
    
  0.911
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.