STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_015793NR LBD domain-containing protein. (325 aa)    
Predicted Functional Partners:
L596_030608
Uncharacterized protein.
    
 0.475
L596_017843
CS domain-containing protein.
   
  0.467
L596_018517
Uncharacterized protein.
    
 0.463
L596_003265
Uncharacterized protein.
    
 0.463
L596_007146
Uncharacterized protein.
    
 0.463
L596_014376
Nuclear receptor domain-containing protein.
    
 0.445
L596_024962
Uncharacterized protein.
    
  0.441
L596_011201
TPR_REGION domain-containing protein.
    
  0.441
L596_007212
Uncharacterized protein.
   
 0.439
L596_017315
Uncharacterized protein.
    
  0.437
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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