Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L596_011257 | L596_014546 | A0A4U5NTC0 | A0A4U5NCA9 | F-box domain-containing protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.433 |
L596_011257 | L596_026311 | A0A4U5NTC0 | A0A4U5M107 | F-box domain-containing protein. | Peptidase_M48 domain-containing protein. | 0.423 |
L596_011257 | L596_026312 | A0A4U5NTC0 | A0A4U5M0Z4 | F-box domain-containing protein. | Peptidase_M48_N domain-containing protein. | 0.423 |
L596_014546 | L596_011257 | A0A4U5NCA9 | A0A4U5NTC0 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | F-box domain-containing protein. | 0.433 |
L596_014546 | L596_026311 | A0A4U5NCA9 | A0A4U5M107 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Peptidase_M48 domain-containing protein. | 0.470 |
L596_014546 | L596_026312 | A0A4U5NCA9 | A0A4U5M0Z4 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | Peptidase_M48_N domain-containing protein. | 0.470 |
L596_026311 | L596_011257 | A0A4U5M107 | A0A4U5NTC0 | Peptidase_M48 domain-containing protein. | F-box domain-containing protein. | 0.423 |
L596_026311 | L596_014546 | A0A4U5M107 | A0A4U5NCA9 | Peptidase_M48 domain-containing protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.470 |
L596_026311 | L596_026312 | A0A4U5M107 | A0A4U5M0Z4 | Peptidase_M48 domain-containing protein. | Peptidase_M48_N domain-containing protein. | 0.950 |
L596_026312 | L596_011257 | A0A4U5M0Z4 | A0A4U5NTC0 | Peptidase_M48_N domain-containing protein. | F-box domain-containing protein. | 0.423 |
L596_026312 | L596_014546 | A0A4U5M0Z4 | A0A4U5NCA9 | Peptidase_M48_N domain-containing protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.470 |
L596_026312 | L596_026311 | A0A4U5M0Z4 | A0A4U5M107 | Peptidase_M48_N domain-containing protein. | Peptidase_M48 domain-containing protein. | 0.950 |