STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_007165Uncharacterized protein. (1035 aa)    
Predicted Functional Partners:
L596_016553
Uncharacterized protein.
    
 0.944
L596_016554
Uncharacterized protein.
    
 0.944
L596_016391
Arrestin_C domain-containing protein.
     
 0.646
L596_008889
ENTH domain-containing protein.
     
 0.621
L596_003781
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
  0.614
L596_008446
TIR domain-containing protein.
    
 0.589
L596_029450
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.579
L596_029448
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.579
L596_029451
Clat_adaptor_s domain-containing protein.
    
  0.579
L596_006909
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.579
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.