STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_008387Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
L596_001837
Uncharacterized protein.
      
 0.537
L596_018408
USP domain-containing protein.
      
 0.531
L596_004718
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
      
 0.481
L596_003510
DNA polymerase.
      
 0.467
L596_002854
Uncharacterized protein.
      
 0.467
L596_020027
Rhomboid domain-containing protein.
      
 0.454
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.