STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_008455SEA domain-containing protein. (791 aa)    
Predicted Functional Partners:
L596_014867
Uncharacterized protein.
   
 
 0.754
L596_028637
Uncharacterized protein.
   
 
 0.717
L596_007094
Uncharacterized protein.
   
 
 0.712
L596_006896
Uncharacterized protein.
   
   0.710
L596_025597
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.709
L596_009539
Uncharacterized protein.
   
 
 0.703
L596_003627
Uncharacterized protein.
   
   0.697
L596_011295
Uncharacterized protein.
   
 
 0.696
L596_026011
Ribosomal_L2_C domain-containing protein.
   
   0.693
L596_030614
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.657
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.