STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_009101Uncharacterized protein. (302 aa)    
Predicted Functional Partners:
L596_025806
Integrin beta; Belongs to the integrin beta chain family.
    
 0.614
L596_023834
Protein kinase domain-containing protein.
    
  0.566
L596_002951
Uncharacterized protein.
    
 0.550
L596_010620
Uncharacterized protein.
      
 0.544
L596_002970
Uncharacterized protein.
    
 
 0.535
L596_008042
FHA domain-containing protein.
    
 0.512
L596_018706
H15 domain-containing protein.
    
 0.474
L596_012716
Uncharacterized protein.
    
 0.474
L596_009361
Uncharacterized protein.
    
 
 0.466
L596_009375
Uncharacterized protein.
    
 
 0.466
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.