STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_003668Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (468 aa)    
Predicted Functional Partners:
L596_030792
Pyruvate carboxyltransferase domain-containing protein.
  
 0.957
L596_014861
Pyruvate carboxyltransferase domain-containing protein.
  
 0.957
L596_020410
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
    
 0.910
L596_006216
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 0.910
L596_002392
Uncharacterized protein.
  
 0.910
L596_014887
Aminotran_1_2 domain-containing protein.
  
 0.909
L596_005620
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.903
L596_006403
Uncharacterized protein.
    
 0.895
L596_016072
PKS_KS domain-containing protein.
  
 0.894
L596_016073
Uncharacterized protein.
  
 0.894
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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