STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_003331Uncharacterized protein. (3089 aa)    
Predicted Functional Partners:
L596_003332
Uncharacterized protein.
 
     0.925
L596_017486
Uncharacterized protein.
    
 0.848
L596_006035
Uncharacterized protein.
    
 0.848
L596_018671
PIPK domain-containing protein.
   
 0.783
L596_014818
C2 NT-type domain-containing protein.
    
 0.783
L596_008403
Uncharacterized protein.
   
 0.777
L596_007888
Uncharacterized protein.
    
 0.760
L596_005491
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.758
L596_004004
IPPc domain-containing protein.
   
 
 0.750
L596_000246
Uncharacterized protein.
   
 0.746
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.