STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_003912BTB_2 domain-containing protein. (174 aa)    
Predicted Functional Partners:
L596_010818
Uncharacterized protein.
    
   0.801
L596_018810
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.692
L596_003682
Uncharacterized protein.
    
 
 0.692
L596_028458
Uncharacterized protein.
   
 0.641
L596_026520
TF_AP-2 domain-containing protein.
   
 0.641
L596_019362
TF_AP-2 domain-containing protein.
   
 0.641
L596_008293
TF_AP-2 domain-containing protein.
   
 0.641
L596_008294
TF_AP-2 domain-containing protein.
   
 0.641
L596_006095
TF_AP-2 domain-containing protein.
   
 0.641
L596_009772
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.634
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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