STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_004245Uncharacterized protein. (1413 aa)    
Predicted Functional Partners:
L596_003465
Uncharacterized protein.
   
 0.999
L596_011769
WH1 domain-containing protein.
   
 0.921
L596_005486
Uncharacterized protein.
    
 0.888
L596_014060
Tyrosine-protein kinase.
   
 0.877
L596_015377
Uncharacterized protein.
    
 0.852
L596_015375
Uncharacterized protein.
    
 0.852
L596_014844
PDZ domain-containing protein.
    
 0.848
L596_014845
PDZ domain-containing protein.
    
 0.848
L596_027931
Non-specific serine/threonine protein kinase.
   
 0.844
L596_015699
Non-specific serine/threonine protein kinase.
   
 0.811
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.