STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_006221Integrase catalytic domain-containing protein. (245 aa)    
Predicted Functional Partners:
L596_006923
WD_REPEATS_REGION domain-containing protein.
    
 0.629
L596_007833
Receptor protein-tyrosine kinase.
    
 0.617
L596_025969
Reverse transcriptase domain-containing protein.
  
 
  0.605
L596_018686
RPA_C domain-containing protein.
   
 0.576
L596_025959
Reverse transcriptase domain-containing protein.
  
 
  0.574
L596_005975
EGF-like domain-containing protein.
    
 0.560
L596_017040
Reverse transcriptase domain-containing protein.
  
     0.514
L596_019538
Reverse transcriptase domain-containing protein.
  
     0.514
L596_027343
Reverse transcriptase domain-containing protein.
  
     0.502
L596_029622
Reverse transcriptase domain-containing protein.
  
     0.501
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
Server load: low (20%) [HD]