STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L596_008078NTF2 domain-containing protein. (132 aa)    
Predicted Functional Partners:
L596_018936
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.995
L596_018051
Uncharacterized protein.
    
 0.987
L596_016864
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.986
L596_023516
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.983
L596_002603
Uncharacterized protein.
   
 0.983
L596_017691
ERCC4 domain-containing protein.
    
 0.979
L596_018201
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 
 0.979
L596_012760
Uncharacterized protein.
    
 
 0.967
L596_006918
Nsp1_C domain-containing protein.
    
 
 0.967
L596_029266
FANCI_HD2 domain-containing protein.
   
 0.966
Your Current Organism:
Steinernema carpocapsae
NCBI taxonomy Id: 34508
Other names: Neoaplectana carpocapsae, S. carpocapsae, Steinernema sp. LE-2017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.