Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJV31608.1 | KJV37022.1 | VI08_13100 | VI08_02240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
KJV37020.1 | KJV37021.1 | VI08_02230 | VI08_02235 | Glycine cleavage system regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
KJV37020.1 | KJV37022.1 | VI08_02230 | VI08_02240 | Glycine cleavage system regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |
KJV37020.1 | dapA | VI08_02230 | VI08_02225 | Glycine cleavage system regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.815 |
KJV37021.1 | KJV37020.1 | VI08_02235 | VI08_02230 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine cleavage system regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
KJV37021.1 | KJV37022.1 | VI08_02235 | VI08_02240 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
KJV37021.1 | dapA | VI08_02235 | VI08_02225 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.567 |
KJV37022.1 | KJV31608.1 | VI08_02240 | VI08_13100 | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
KJV37022.1 | KJV37020.1 | VI08_02240 | VI08_02230 | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine cleavage system regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |
KJV37022.1 | KJV37021.1 | VI08_02240 | VI08_02235 | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
KJV37022.1 | dapA | VI08_02240 | VI08_02225 | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.407 |
dapA | KJV37020.1 | VI08_02225 | VI08_02230 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Glycine cleavage system regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.815 |
dapA | KJV37021.1 | VI08_02225 | VI08_02235 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.567 |
dapA | KJV37022.1 | VI08_02225 | VI08_02240 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |