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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV35253.1Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (895 aa)    
Predicted Functional Partners:
KJV33830.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.921
KJV32521.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.921
KJV32523.1
Ricin B lectin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.913
KJV25365.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.895
KJV33865.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.856
KJV36193.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.851
KJV35849.1
Arabinan endo-1,5-alpha-L-arabinosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.836
KJV35697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.828
KJV35252.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.804
KJV35365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.803
Your Current Organism:
Luteibacter yeojuensis
NCBI taxonomy Id: 345309
Other names: DSM 17673, Dyella sp. R2A16-10, Dyella yeojuensis, Dyella yeojuensis Kim et al. 2006, KACC 11405, L. yeojuensis, Luteibacter yeojuensis (Kim et al. 2006) Kampfer et al. 2009, strain R2A16-10
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